Recent Progress of Influenza Vaccine Production
Haochen Yu
Faculty of Biology and Food and Engineering, Changshu institute of technology, Changshu, 215500, China
Keywords: Influenza Vaccine, Vaccine Production, MDCK Cells.
Abstract: In today's world of relatively complete public health, people still struggle with flu epidemics. Influenza
vaccine is a good means of protection against influenza. However, there are still some shortcomings in today's
influenza vaccine production technology. This paper focuses on influenza vaccine production. It first
introduces the characteristics of influenza virus and the importance of vaccination. Then it summarizes two
common production methods: the traditional chicken embryo preparation and cell substrate culture taking
Madin-Darby Canine Kidney Cells (MDCK) cells as an example). The chicken embryo method has a long
history, but is limited by low production efficiency and potential antigenicity changes. MDCK cell-based
production has advantages like cell receptors similar to human cells, yet faces challenges such as poor cell
growth and safety concerns. By comparing these methods, the study aims to identify existing problems. The
outlook suggests further research on mammalian cell cultivation and gene--editing to improve vaccine
production, with the ultimate goal of combining big data and artificial intelligence (AI) to predict virus
mutations and enhance vaccine efficiency.
1 INTRODUCTION
Influenza virus belongs to the family
Orthomyxoviridae and is a single-stranded, negative-
stranded RNA virus whose structure includes a core
and an envelope. The core consists of nucleoprotein
and RNA polymerase. The nucleoprotein is type-
specific, and influenza viruses can be categorized into
four types: A, B, C, and D. The envelope contains two
important glycoproteins, hemagglutinin (HA) and
neuraminidase (NA). The envelope contains two
important glycoprotein spines, hemagglutinin (HA)
and neuraminidase (NA). HA binds to host cell
surface receptors and mediates viral entry into the
cell, while NA contributes to the release and diffusion
of newly formed viruses from infected cells, and both
glycoproteins are susceptible to mutation. Influenza
viruses are highly contagious, mainly through droplet
transmission, but also indirectly through contact with
contaminated hands and daily utensils. The average
person is susceptible and usually develops the disease
1-4 days after infection. Symptoms include high
fever, headache, malaise, muscle aches, cough, etc. In
severe cases, the disease can lead to pneumonia,
respiratory failure, and other serious illnesses. In
severe cases, it can lead to complications such as
pneumonia and respiratory failure, and even be life-
threatening. Influenza viruses mutate easily. The HA
and NA of influenza A viruses often mutate, leading
to the emergence of new subtypes and pandemics.
Influenza B viruses also undergo antigenic mutation,
but to a lesser extent, usually causing localized
epidemics. Influenza C viruses are generally
disseminated and relatively mild. Influenza D viruses
infect mainly pigs and cattle and are less pathogenic
to humans. Despite significant improvements in
healthcare and public health, viral infections remain
one of the leading causes of human and animal
disease worldwide. There is no doubt that influenza
poses a considerable risk and potential threat to
human health. Influenza is transmitted by airborne
droplets, is labile and highly contagious, and most
people are susceptible to infection (Jin et al., 2024).
For example, the influenza A virus poses a global and
ongoing threat to human health, causing between
290,000 and 600,000 deaths and as many as 5 million
cases of severe illness each year (Sekiya et al. 2021).
Although people nowadays pay more attention to
public health and prevent influenza by wearing masks
and other behaviors, this only prevents mass
transmission and infection but does not reduce the
likelihood of individuals being infected. It has been
reported that the use of masks etc. does not reduce the
risk of influenza, confirmed viral respiratory
infections, influenza-like illness, or any clinical
respiratory infection. However, in the case of
influenza vaccination, the body's immune system is
192
Yu, H.
Recent Progress of Influenza Vaccine Production.
DOI: 10.5220/0014446200004933
Paper published under CC license (CC BY-NC-ND 4.0)
In Proceedings of the 1st International Conference on Biomedical Engineering and Food Science (BEFS 2025), pages 192-197
ISBN: 978-989-758-789-4
Proceedings Copyright © 2026 by SCITEPRESS – Science and Technology Publications, Lda.
effectively activated, which can protect an individual
and also control the mass spread of influenza.
Therefore, influenza vaccination is a relatively
economical and convenient way of control (Aimi et
al, 1990). Influenza vaccines are made from
artificially cultured influenza viruses that have been
inactivated and then processed, with the main
components being proteins such as the HA proteins
described above. The traditional method of preparing
influenza vaccines on a large scale is the production
of chicken embryos. However, in the face of a global
pandemic of highly pathogenic influenza, especially
avian influenza, this method does not meet market
demand. Therefore, research organizations and
vaccine companies are collaborating to develop new
production technologies such as cell culture.
Compared with the production of influenza vaccine
from chicken embryos, cell production of influenza
vaccine has the advantages of high production
efficiency and good results. In this paper, we
summarize two common large-scale production
methods, compare them, and analyze their
advantages and disadvantages.
2 MECHANISM OF ACTION
OFINFLUENZA VACCINE
Influenza vaccines can induce the body to produce
immune and cell-mediated immune responses. The
humoral response is mainly based on the systemic
response IgG and the local antibody response sIgA,
and the cellular immune response is primarily based
on the T-cell response. Both responses are capable of
inducing a cross-protective effect. Among them, IgA
mainly prevents the influenza virus from being
absorbed by the body, IgG mainly prevents the lower
respiratory tract from being infected with the virus,
and T cells mainly prevent further expansion of the
viral hazard by specifically recognizing and
removing the virus from infected tissues.
3 INFLUENZA VACCINE
PRODUCTION METHODS
The chicken embryo method of vaccine preparation
began in 1937 as the first successful method of
growing influenza viruses. In 1941, the U.S.
government approved the use of a vaccine prepared
by this method, and in 1945 it was used on a large
scale by the U.S. military, where it proved to be
effective.
This crude vaccine was usually prepared by
injecting the virus into the urocystic blastocysts of
chicken embryos, culturing them for some time, and
then passing them through erythrocytes and a series
of relatively crude isolations, followed by
formaldehyde inactivation of the virus to obtain the
inactivated influenza virus or the crude vaccine.
In the 1960s, thanks to the rapid development and
application of isolation techniques, people were able
to better purify the virus, and the whole virus vaccine
was born. Today, the commercially available chicken
embryo influenza vaccine is highly effective and
protects 90% of those vaccinated. (Belshe et al, 2001,
Belshe et al, 2004, Belshe et al, 2004, Nichol, 2003)
3.1 Inactivated Influenza Whole Virus
Vaccine
The influenza virus was injected into the allantoic
fluid of chicken embryos and incubated until stable.
After stabilization, the chicken embryo allantoic fluid
was removed and inactivated with formalin. After
passing the sterility test and inactivation test, the
inactivated allantoic fluid is separated by
ultracentrifugation or chromatography, and packaged
and reprocessed to obtain the vaccine. The whole
virus-inactivated vaccine obtained by this method has
high side effects, does not apply to children under 6
years of age, and has a relatively narrow application
range.
3.2 Influenza Virus Lysate Vaccine
Based on the whole-virus inactivated vaccine, the
inactivated virus is lysed by selecting a suitable
lysing agent, and only the biomolecules that can be
recognized by the immune system are retained, such
as HA (hemagglutinin protein), NA (neuraminidase
protein), and part of the M proteins (divided into two
kinds, M1 and M2, M1 is responsible for the
assembly of the virus and budding, and M2 is
responsible for the opening of the cellular ion channel
to make the virus survive in the cell, M1 is
responsible for the viral M1 is responsible for virus
assembly and budding, and M2 is responsible for
opening cellular ion channels to make the
intracellular environment acidic, which leads to the
fusion of the viral envelope with the endosomal
membrane. The fusion of the envelope with the
endosomal membrane facilitates the release of RNP
(ribonucleoprotein: wrapped around the genetic RNA
of the virus) and NP (nucleoprotein: tightly bound to
the viral RNA to form RNP) proteins from the virus.
This adaptation is relatively widespread (Luo
Recent Progress of Influenza Vaccine Production
193
2012.)3.3 Subunit inactivated influenza vaccines
Based on the lysed influenza virus vaccine, HA,
NA, and other proteins are broken down and purified
by appropriate lysis conditions to form a vaccine,
which can be adapted to a larger proportion of the
population than previous methods. This method can
be adapted to a larger proportion of the population,
especially children and the elderly with weakened
immunity, than previous methods.
4 CELL MATRIX CULTURE
Currently, MDCK, PER.C6, AGE.CR and
EB14/EB66 cells have been established and used for
influenza vaccine production (Wen et al, 2015, Chu
et al, 2009, van et al, 2011). Among these cell lines,
the MDCK cell line is currently more mature.
Therefore, in this paper, MDCK cells are used as an
example of cell-matrix culture.
4.1 MDCK Cell Production
Due to the evolution of the virus, vaccines produced
from chicken embryos do not completely prevent
influenza (this is due to some differences between the
receptors on chicken embryo cells and those n the 2
mammalian cells), so the World Health Organization
proposed the use of mammalian cells for vaccine
production in 1995. Among them, MDCK cells were
experimentally tested to be the most suitable for
vaccine production (Huang et al, 2015, Suderman et
al, 2021). MDCK cells, known as Madin-Darby
Canine Kidney Cells, were first established by SH
Madin and NB Darby of the Naval Research
Laboratory at the University of California, Berkeley,
USA, and were derived from the kidneys of healthy
Cocker Spaniel dogs. This cell surface receptor is
more similar to human cell surface receptors, so
influenza viruses do not need to adapt to changes in
cell receptors in culture, reducing the likelihood of
mutation.
4.2 Advantages and Challenges of
Using MDCK Cells for Vaccine
Production
The receptors on the surface of MDCK cells are
similar to those of human somatic cells, which can
prevent viruses from mutating during the culture
process. However, it faces many problems in the
culture process, such as slow growth, high
differentiation, low susceptibility to infection, and
poor stability. In addition, it needs to be attached to
the surface of the carrier in the culture medium for
growth, which is easily limited by the surface area of
the substrate and difficult to realize large-scale
production. Therefore, it needs to be domesticated
during the production process to facilitate its mass
production.
4.3 Preparation of Vaccines from
MDCK Cells
4.3.1 Microcarrier Culture of MDCK Cells
In 1967, Van Wezel (van,1967) introduced the
microcarrier culture method so that the traditional
method was no longer a limitation. Microcarriers are
usually magnetic beads with a diameter of 90-350 μm
and a density slightly greater than that of water
(Alfred et al. 2011). It can support cell attachment
growth with a larger surface area to volume ratio
compared to single cells. Since microcarrier-based
cell culture can be performed in suspension mode,
metabolites, dissolved oxygen, nutrients, and pH of
the medium can be controlled in a timely and efficient
manner; moreover, cells cultured on microcarriers
can better maintain their cellular phenotype because
of the mechanical support provided to them by the
microcarriers during the culture process (Healthcare,
G. E et al ,2005). Some researchers compared the
growth of an influenza virus strain (A/PR8/34) in
MDCK cells (Tree et al, 2001) and compared the viral
yields of different porous and solid microcarrier
cultures, as well as those of conventional cell culture
methods and chicken embryo cultures. The higher
number of cells in solid vector culture may be
because solid vectors have a more suitable surface for
MDCK cell attachment, while porous vectors may
have other limitations such as oxygen and nutrient
transport limitations, and accumulation of wastes
within the structure, in addition to differences in the
concentration of solid and porous vectors per
milliliter of liquid and the speed of agitation that may
also affect the growth of MDCK cells. This effect of
different microcarriers in cell culture has been
demonstrated in other cell lines such as BHK cells
(Alves et al, 1996).
4.3.2 MDCK Cell Suspension Culture
Domestication Technology
This method mainly solves two problems in MDCK
cell culture, one is to solve the walling problem in
MDCK cell culture, and the other is to solve the
serum-dependent problem in MDCK cell culture. At
BEFS 2025 - International Conference on Biomedical Engineering and Food Science
194
present, there are two main ways to domesticate
MDCK suspension cells: (1) Before converting
MDCK cells into suspension cells, they are first
adapted to be cultured in a serum-free medium of
some known composition. This process can be
accomplished by both direct and indirect methods.
The direct method is a complete media change.
Specifically, the direct method of domesticating
MDCK cells is the gradual conversion of traditional
serum-rich medium to serum-free medium. This
process can be carried out in steps, gradually reducing
the proportion of serum while increasing the
proportion of serum-free medium, so that cultured
MDCK cells can gradually adapt to the serum-free
environment and grow stably. An indirect way to
domesticate MDCK cells is to introduce specific
small molecule compounds or biofactors during the
domestication process to facilitate the adaptation of
the cells to serum-free culture conditions. These
biokines and compounds mimic growth factors and
cell signaling pathways found in serum and help
MDCK cells adapt to the serum-free environment.
The goal of these domestication methods is to reduce
or eliminate the serum dependence of MDCK cells
and adapt them to serum-free culture conditions. This
will fulfill biosafety requirements, reduce the
potential risk of exogenous pathogenic factors, and
lower production costs. In conclusion, the
domestication methods of MDCK suspension cells
mainly include direct and indirect methods, which are
cultured under serum-free culture conditions to
gradually reduce the dependence on serum and
provide more applicable cell lines for further research
and production. (2) Gene Modification. It has been
documented that the expression of the full-length
human Siat7e gene correlates with the wall-
dependence of the cells. The Siat7e gene encodes the
human sialyltransferase ST6GalNAc V, which is
responsible for the synthesis of GD1α (glycosidic
aminoglycoside) from GM1b
(monosialylguanoside), and shows higher levels of
Siat7e gene expression in non-adherent-dependent
HeLa cells as compared to adherent-dependent HeLa
cells (Jaluria et al ,2007), and when inhibition of
Siat7e gene expression was used with SiRNA
technology, significantly enhanced adhesion
properties were observed in these cells. Siat7e gene
expression and a significant enhancement of the
adhesion properties of these cells were observed
when Siat7e gene expression was inhibited using
siRNA technology. This implies that the Siat7e gene
may have an inhibitory role in the cell wall
attachment process. This finding made it possible to
make mammalian cells grow without wall adherence
by genetic modification. Chu et al (Chu et al ,2009)
constructed MDCK cell lines stably expressing
Siat7e by altering the adherence-dependence of
MDCK cells through a genetic engineering approach
so that they could be cultured in suspension; they
utilized human Siat7e genes to express Siat7e genes
in suspended MDCK cells. They transformed the
eukaryotic expression plasmid of the full-length
human Siat7e gene into E. coli DH5α, purified and
extracted the plasmid ST6GalNac V for transfection
by the QIAprep Spin Miniprep kit (Qiagen), and then
transfected the MDCK cells with the transfection
reagent Lipofectamine2000 Regent to express the
Siat7e in MDCK cell lines. MDCK cell lines
expressing Siat7e were altered to be non-adhesion
dependent. Results of subsequent production
experiments performed after infection of the
modified cells with influenza B/Victoria/504/2000
virus showed that the cell-derived virus was
antigenically similar to the chicken embryo-derived
virus and its nucleotide sequence was identical. Cells
expressing Siat7e produced hemagglutinin
(expressed as hemagglutination units per 106 cells)
with approximately 20-fold higher specific yields of
hemagglutinin than those produced by parental
MDCK cells.
4.3.3 MDCK Cell Culture for Influenza
Virus Vaccines
Based on the suspension culture technique described
above, it is possible to obtain different MDCK cells
suitable for different production conditions by
obtaining the virus from cells at different stages. If
the virus is cultured in chicken embryos, it needs to
be cultured in MDCK cells first to adapt to the cells.
The cultured virus is added to the cells for co-culture,
allowing the virus to enter the cells and pass on until
the virus is stabilized. Finally, the cell suspension is
collected, clarified filtered, purified by formaldehyde
inactivation, and lysed to obtain the influenza virus
vaccine.
5 TECHNICAL SUMMARY
COMPARISON OF
PRODUCTION METHODS
(COMPARISON OF
DISCOVERED VACCINE
PRODUCTION METHODS)
In terms of production operation, the influenza
Recent Progress of Influenza Vaccine Production
195
vaccine cultured in the chicken embryo has relatively
less complexity of operation than the influenza
vaccine cultured in MDCK cell culture, and it is
found to be early, has a long period of use, and has a
guaranteed safety, but in terms of product quality the
cells cultured in MDCK cell culture are closer to the
receptors of human cells. In addition, during viral
proliferation, the instability of its RNA leads to
changes in the aspartic acid residue sites of the
expressed proteins, causing glycosylation shifts or
leading to other mutations. This makes the produced
vaccine weak or even ineffective. However, through
the study of Li et al ( Li et al 2021), it was found that
the glycosylation sites and potential sites of viral HA
proteins produced by MDCK cells were more than
those of vaccines produced by chicken embryos, so
MDCK cells were gradually selected for vaccine
production.
6 CHALLENGES AND
PROSPECTS
Limitations of utilizing chicken embryos for
influenza vaccine production include (1) Lower
production efficiency compared to cell culture
making it difficult to meet the demand in case of an
influenza pandemic. (2) Some findings suggest that
the chicken embryo-adapted influenza virus strains
used for vaccine production have three amino acid
mutations in the antigenic sites B [H156Q, G186V]
and D [S219Y] of the strains themselves compared to
the prototype strains recommended by the World
Health Organization and that these mutations may
result in significant changes in the antigenicity,
immunogenicity, and efficacy of the vaccine.
(Skowronski et al, 2014) These challenges may allow
further study of glycosylation of viral surface
proteins. A limitation of influenza vaccine production
with MDCK cells is that its safety needs to be
improved. MDCK cells have been reported to have a
potential risk of tumorigenesis in immunodeficient
mice (Jin et al., 2024). The tumor genesis and
influencing factors can be further investigated.
7 CONCLUSION
The purpose of this study is to summarize and
introduce the production methods of influenza
vaccine and to identify the problems of the existing
production methods. Through this study, it was found
that the process of human vaccine production is a race
against the mutation of pandemic viruses, so in the
future, more in-depth research can be conducted on
the cultivation of influenza vaccines by other
mammalian cells similar to MDCK cells, as well as
due to the extensive use of gene technology, or can be
genetically edited on existing MDCK cells, so that its
receptor can be more compatible with that of human
cells or can be combined with influenza viruses more
smoothly, which can prepare for the emergence of
more potent influenza viruses in the future. It is also
hoped that in the future, it will be possible to make
mammalian cells more resistant to influenza viruses
so that they can be prepared for the emergence of
more potent influenza viruses. It is also hoped that in
the future, the vaccines produced by mammalian cells
will be safer, more stable, and simpler, and can be
customized for the mass production of different types
of influenza. The ultimate goal is to be able to
combine big data and artificial intelligence
technology to predict the mutation of the virus so that
the efficiency of the vaccine produced can be
increased or even reach 100% effectiveness.
REFERENCES
Aimi, J.et al. 1990. Cloning of a cDNA encoding
adenylosuccinate lyase by functional complementation
in Escherichia coli. The Journal of biological
chemistry, 265(16), 9011–9014.
Alfred, R. et al. 2011. Efficient suspension bioreactor
expansion of murine embryonic stem cells on
microcarriers in serum-free medium. Biotechnology
progress, 27(3), 811–823.
Alves, P. M. et al. 1996. Two-dimensional versus three-
dimensional culture systems: Effects on growth and
productivity of BHK cells. Biotechnology and
bioengineering, 52(3), 429–432.
Belshe, R. B. et al. 2001. Safety, efficacy and effectiveness
of cold-adapted, live, attenuated, trivalent, intranasal
influenza vaccine in adults and children. Philosophical
transactions of the Royal Society of London. Series B,
Biological sciences, 356(1416), 1947–1951.
Belshe, R. B. et al. 2004. Safety, efficacy, and effectiveness
of live, attenuated, cold-adapted influenza vaccine in an
indicated population aged 5-49 years. Clinical
infectious diseases : an official publication of the
Infectious Diseases Society of America, 39(7), 920–
927.
Belshe, R., et al. 2004. Safety, immunogenicity and
efficacy of intranasal, live attenuated influenza
vaccine. Expert review of vaccines, 3(6), 643–654.
Chu, C et al. 2009. Conversion of MDCK cell line to
suspension culture by transfecting with human siat7e
gene and its application for influenza virus
production. Proceedings of the National Academy of
BEFS 2025 - International Conference on Biomedical Engineering and Food Science
196
Sciences of the United States of America, 106(35),
14802–14807.
Healthcare, G. E., & Biosciences, A. 2005. Microcarrier
cell culture: principles and methods. General Electric
Company.
Huang, D et al. 2015. Serum-Free Suspension Culture of
MDCK Cells for Production of Influenza H1N1
Vaccines. PloS one, 10(11), e0141686.
Jaluria, P. et al. 2007. Application of microarrays to
identify and characterize genes involved in attachment
dependence in HeLa cells. Metabolic
engineering, 9(3), 241–251.
Jin. W. L et al., 2024. The Application Progress of Serum-
free Suspension Culture Technology of MDCK Cells in
Influenza Vaccine Study and Production,
Biotechnology Bulletin, 40(2), 38-47
Li, J. et al. 2021. Comparison of N-linked glycosylation on
hemagglutinins derived from chicken embryos and
MDCK cells: a case of the production of a trivalent
seasonal influenza vaccine. Applied microbiology and
biotechnology, 105(9), 3559–3572.
Luo M. 2012. Influenza virus entry. Advances in
experimental medicine and biology, 726, 201–221.
Nichol K. L. 2003. The efficacy, effectiveness and cost-
effectiveness of inactivated influenza virus
vaccines. Vaccine, 21(16), 1769–1775.
Sekiya, T et al. 2021. Selecting and Using the Appropriate
Influenza Vaccine for Each Individual. Viruses, 13(6),
971.
Skowronski, D. M. et al. 2014. Low 2012-13 influenza
vaccine effectiveness associated with mutation in the
egg-adapted H3N2 vaccine strain not antigenic drift in
circulating viruses. PloS one, 9(3), e92153.
Suderman, M. et al. 2021. Comparative Susceptibility of
Madin-Darby Canine Kidney (MDCK) Derived Cell
Lines for Isolation of Swine Origin Influenza A Viruses
from Different Clinical Specimens. Viruses, 13(12),
2346.
Tree, J. A. et al. 2001. Comparison of large-scale
mammalian cell culture systems with egg culture for
the production of influenza virus A vaccine
strains. Vaccine, 19(25-26), 3444–3450.
van Wezel A. L. 1967. Growth of cell-strains and primary
cells on micro-carriers in homogeneous
culture. Nature, 216(5110), 64–65.
van Wielink R et al. 2011. Adaptation of a Madin-Darby
canine kidney cell line to suspension growth in serum-
free media and comparison of its ability to produce
avian influenza virus to Vero and BHK21 cell
lines. Journal of virological methods, 171(1), 53–60.
Wen, Z. et al. 2015. Establishment of MDCK Stable Cell
Lines Expressing TMPRSS2 and MSPL and Their
Applications in Propagating Influenza Vaccine Viruses
in Absence of Exogenous Trypsin. Biotechnology
research international, 2015, 402628.
Recent Progress of Influenza Vaccine Production
197