Correlated Mutations of Positions Among Structural Proteins in Delta and Omicron Variants for SARS-CoV-2 Amino Acid Sequences

Yuichi Shimaya, Kouich Hirata

2023

Abstract

In this paper, we find the correlated mutations of positions among structural proteins of spike, envelop, membrane and nucleocapsid proteins in amino acid sequences of SARS-CoV-2. Here, we adopt the algorithm designed by Shimada et al. (2012) of finding the correlated mutations formulated by joint entropy. In particular, we discuss whether or not the found correlated mutations contains spike protein substitutions in SARS-CoV-2 Delta and Omicron variants.

Paper Citation

in Harvard Style

Shimaya Y. and Hirata K. (2023). Correlated Mutations of Positions Among Structural Proteins in Delta and Omicron Variants for SARS-CoV-2 Amino Acid Sequences. In Proceedings of the 12th International Conference on Pattern Recognition Applications and Methods - Volume 1: ICPRAM, ISBN 978-989-758-626-2, pages 344-349. DOI: 10.5220/0011676000003411

in Bibtex Style

@conference{icpram23,
author={Yuichi Shimaya and Kouich Hirata},
title={Correlated Mutations of Positions Among Structural Proteins in Delta and Omicron Variants for SARS-CoV-2 Amino Acid Sequences},
booktitle={Proceedings of the 12th International Conference on Pattern Recognition Applications and Methods - Volume 1: ICPRAM,},
year={2023},
pages={344-349},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0011676000003411},
isbn={978-989-758-626-2},
}

in EndNote Style

TY - CONF

JO - Proceedings of the 12th International Conference on Pattern Recognition Applications and Methods - Volume 1: ICPRAM,
TI - Correlated Mutations of Positions Among Structural Proteins in Delta and Omicron Variants for SARS-CoV-2 Amino Acid Sequences
SN - 978-989-758-626-2
AU - Shimaya Y.
AU - Hirata K.
PY - 2023
SP - 344
EP - 349
DO - 10.5220/0011676000003411