Analysis of Whole Genome Characteristics of Helianthus annuus Longkuiza 6 Chloroplast

Jun Ma

2022

Abstract

The whole chloroplast genome was assembled and annotated on the leaf high-throughput sequencing data of the oil sunflower hybrid longkuiza 6. The results showed that the whole chloroplast genome was 151124bp in length, including a typical tetrad structure. Two single-copy regions were separated by a pair of inverted repeat regions. The lengths of LSC and SSC were 83548bp and 18308bp, respectively. The chloroplast genome encodes a total of 127 genes, including 84 protein-coding genes, 8 rRNA genes and 35 tRNA genes. In the chloroplast genome of Helianthus annuus longkuiza 6, there are a total of 18 genes containing introns, except for the ycf3 and clpP genes, the rest contain 1 intron. In the protein coding gene of H. annuus longkuiza 6, leucine is the amino acid with the highest codon encoding rate, and the amino acid with the lowest encoding rate is cysteine.

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Paper Citation


in Harvard Style

Ma J. (2022). Analysis of Whole Genome Characteristics of Helianthus annuus Longkuiza 6 Chloroplast. In Proceedings of the 4th International Conference on Biomedical Engineering and Bioinformatics - Volume 1: ICBEB, ISBN 978-989-758-595-1, pages 749-752. DOI: 10.5220/0011294400003443


in Bibtex Style

@conference{icbeb22,
author={Jun Ma},
title={Analysis of Whole Genome Characteristics of Helianthus annuus Longkuiza 6 Chloroplast},
booktitle={Proceedings of the 4th International Conference on Biomedical Engineering and Bioinformatics - Volume 1: ICBEB,},
year={2022},
pages={749-752},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0011294400003443},
isbn={978-989-758-595-1},
}


in EndNote Style

TY - CONF

JO - Proceedings of the 4th International Conference on Biomedical Engineering and Bioinformatics - Volume 1: ICBEB,
TI - Analysis of Whole Genome Characteristics of Helianthus annuus Longkuiza 6 Chloroplast
SN - 978-989-758-595-1
AU - Ma J.
PY - 2022
SP - 749
EP - 752
DO - 10.5220/0011294400003443