loading
Papers

Research.Publish.Connect.

Paper

Paper Unlock

Authors: Gabriel Kind ; Eric Zuchantke and Röbbe Wünschiers

Affiliation: University of Applied Sciences Mittweida, Germany

ISBN: 978-989-758-070-3

Keyword(s): Synthetic Biology, Big Data, Omics, Warehouses, Databases, Knowledge-base, Wisdom of the Crowd.

Related Ontology Subjects/Areas/Topics: Algorithms and Software Tools ; Artificial Intelligence ; Bioinformatics ; Biomedical Engineering ; Databases and Data Management ; Genomics and Proteomics ; Model Design and Evaluation ; Soft Computing ; Visualization

Abstract: Nowadays, life science research is dominated by two conditions: interdisciplinarity and high-throughput. The former leads to highly diverse datasets from a data type point of view while high-throughput yields massive amounts of data. Both aspects are reflected by the byte-growth of public bio-databases and the sheer number of specialised databases or databases of databases (i.e. data warehouses). We provide an insight to the development of a biodata knowledge base (dubbed CyanoFactory KB) targeted to bio-engineers in the field of synthetic biology and exemplify the need for data type specific data curation and cross-linking. CyanoFactory KB is unique in incorporating experimental data from a broad range of scientific methods that are based on one strain of Synechocystis sp. PCC 6803. The knowledge base can be accessed upon request via cyanofactory.hs-mittweida.de.

PDF ImageFull Text

Download
CC BY-NC-ND 4.0

Sign In Guest: Register as new SciTePress user now for free.

Sign In SciTePress user: please login.

PDF ImageMy Papers

You are not signed in, therefore limits apply to your IP address 3.228.21.186

In the current month:
Recent papers: 100 available of 100 total
2+ years older papers: 200 available of 200 total

Paper citation in several formats:
Kind, G.; Zuchantke, E. and Wünschiers, R. (2015). CyanoFactory Knowledge Base & Synthetic Biology - A Plea for Human Curated Bio-databases.In Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms - Volume 1: BIOINFORMATICS, (BIOSTEC 2015) ISBN 978-989-758-070-3, pages 237-242. DOI: 10.5220/0005285802370242

@conference{bioinformatics15,
author={Gabriel Kind. and Eric Zuchantke. and Röbbe Wünschiers.},
title={CyanoFactory Knowledge Base & Synthetic Biology - A Plea for Human Curated Bio-databases},
booktitle={Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms - Volume 1: BIOINFORMATICS, (BIOSTEC 2015)},
year={2015},
pages={237-242},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0005285802370242},
isbn={978-989-758-070-3},
}

TY - CONF

JO - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms - Volume 1: BIOINFORMATICS, (BIOSTEC 2015)
TI - CyanoFactory Knowledge Base & Synthetic Biology - A Plea for Human Curated Bio-databases
SN - 978-989-758-070-3
AU - Kind, G.
AU - Zuchantke, E.
AU - Wünschiers, R.
PY - 2015
SP - 237
EP - 242
DO - 10.5220/0005285802370242

Login or register to post comments.

Comments on this Paper: Be the first to review this paper.