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Authors: Askarbek Orakov 1 ; Nazgul Sakenova 1 ; Igor Goryanin 2 and Anatoly Sorokin 3

Affiliations: 1 Okinawa Institute of Science and Technology and Nazarbayev University, Japan ; 2 Tianjin Institute of Industrial Biotechnology, University of Edinburgh and Okinawa Institute of Science and Technology, China ; 3 Institute of Cell Biophysics RAS and Moscow Institute of Physics and Technology, Russian Federation

ISBN: 978-989-758-280-6

Keyword(s): Metagenomics, Interactive Data Analysis, Functional Analysis, KEGG Pathways, Taxonomic Analysis.

Related Ontology Subjects/Areas/Topics: Algorithms and Software Tools ; Artificial Intelligence ; Bioinformatics ; Biomedical Engineering ; Databases and Data Management ; Next Generation Sequencing ; Soft Computing ; Visualization

Abstract: The functional and taxonomic analysis is the critical step in understanding the interspecies interaction within the microbial communities. Currently, these types of analysis are run independently, which makes interpretation of the results hard and error-prone. Here we present ASAR (Advanced metagenomic Sequence Analysis in R) Database, the interactive tool and the databases for storage and exploratory analysis of the metagenomic sequencing data along three dimensions: taxonomy, function, and environmental conditions.

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Paper citation in several formats:
Orakov, A.; Sakenova, N.; Goryanin, I. and Sorokin, A. (2018). ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes.In Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 3 BIOINFORMATICS: BIOINFORMATICS, ISBN 978-989-758-280-6, pages 196-200. DOI: 10.5220/0006722801960200

@conference{bioinformatics18,
author={Askarbek Orakov. and Nazgul Sakenova. and Igor Goryanin. and Anatoly Sorokin.},
title={ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes},
booktitle={Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 3 BIOINFORMATICS: BIOINFORMATICS,},
year={2018},
pages={196-200},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0006722801960200},
isbn={978-989-758-280-6},
}

TY - CONF

JO - Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 3 BIOINFORMATICS: BIOINFORMATICS,
TI - ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes
SN - 978-989-758-280-6
AU - Orakov, A.
AU - Sakenova, N.
AU - Goryanin, I.
AU - Sorokin, A.
PY - 2018
SP - 196
EP - 200
DO - 10.5220/0006722801960200

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