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Authors: Anatole Chessel 1 ; Ronan Fablet 1 ; Charles Kervrann 2 and Frederic Cao 2

Affiliations: 1 IFREMER/LASAA, France ; 2 IRISA/VISTA, France

Keyword(s): Computer vision, otolith, fish biology and ecology, biological image analysis, detection a contrario, variational methods.

Related Ontology Subjects/Areas/Topics: Applications and Services ; Biomedical Engineering ; Biomedical Signal Processing ; Computer Vision, Visualization and Computer Graphics ; Medical Image Detection, Acquisition, Analysis and Processing

Abstract: Otoliths are small stone located in fish inner ears and characterised by an accretionnary growth. They act as a biological archive and are of much use in marine biology and ecology. In this article a computer vision framework is presented which recover the successive shapes of the otolith and the significant ridges and valleys from a 2D grayscale image. Seeing vision processes as complex systems, an iterated process is presented using two perceptual information, contrast and good continuity. The successive concentric shapes of the otoliths are recovered as the level-sets of a dome shaped potential function, computed in a variational framework. Potential applications includes in particular fish age estimation, otoliths morphogenesis modelling, otolith proxy fusion.

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Paper citation in several formats:
Chessel, A.; Fablet, R.; Kervrann, C. and Cao, F. (2008). OTOLITH IMAGE ANALYSIS BY COMPUTER VISION. In Proceedings of the First International Conference on Bio-inspired Systems and Signal Processing (BIOSTEC 2008) - Volume 2: BIOSIGNALS; ISBN 978-989-8111-18-0; ISSN 2184-4305, SciTePress, pages 490-497. DOI: 10.5220/0001067204900497

@conference{biosignals08,
author={Anatole Chessel. and Ronan Fablet. and Charles Kervrann. and Frederic Cao.},
title={OTOLITH IMAGE ANALYSIS BY COMPUTER VISION},
booktitle={Proceedings of the First International Conference on Bio-inspired Systems and Signal Processing (BIOSTEC 2008) - Volume 2: BIOSIGNALS},
year={2008},
pages={490-497},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0001067204900497},
isbn={978-989-8111-18-0},
issn={2184-4305},
}

TY - CONF

JO - Proceedings of the First International Conference on Bio-inspired Systems and Signal Processing (BIOSTEC 2008) - Volume 2: BIOSIGNALS
TI - OTOLITH IMAGE ANALYSIS BY COMPUTER VISION
SN - 978-989-8111-18-0
IS - 2184-4305
AU - Chessel, A.
AU - Fablet, R.
AU - Kervrann, C.
AU - Cao, F.
PY - 2008
SP - 490
EP - 497
DO - 10.5220/0001067204900497
PB - SciTePress