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Authors: Fatiha Boubekeur 1 ; Sabrina Cherdioui 1 and Yassine Djouadi 2

Affiliations: 1 Mouloud Mammeri University, Algeria ; 2 USTHB University, Algeria

ISBN: 978-989-8565-75-4

Keyword(s): Knowledge Discovery, Biomedical Literature, MEDLINE, MeSH Concepts, Semantic Relatedness, Swanson’s Discovery.

Related Ontology Subjects/Areas/Topics: Artificial Intelligence ; BioInformatics & Pattern Discovery ; Concept Mining ; Information Extraction ; Knowledge Discovery and Information Retrieval ; Knowledge-Based Systems ; Mining Text and Semi-Structured Data ; Symbolic Systems

Abstract: Knowledge discovery in literature aims at searching for hidden and previously unknown knowledge within the published literature. Swanson’s discoveries on fish oil/Raynaud disease or migraine/magnesium connections from MEDLINE, an online bibliographic biomedical database, exemplify such discovery. In this paper, we present a novel approach for literature-based knowledge discovery that relies on the joint use of (1) flexible information retrieval techniques and (2) concepts’ semantic relatedness to discover hidden connections between MeSH concepts in the published biomedical scientific literature. The approach has been tested by replicating the Swanson's early discovery on fish oil/Raynaud disease connection. The obtained results show the effectiveness of our approach.

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Paper citation in several formats:
Boubekeur, F.; Boubekeur, F.; Cherdioui, S. and Djouadi, Y. (2013). Semantic-based Knowledge Discovery in Biomedical Literature.In Proceedings of the International Conference on Knowledge Discovery and Information Retrieval and the International Conference on Knowledge Management and Information Sharing - Volume 1: KDIR, (IC3K 2013) ISBN 978-989-8565-75-4, pages 37-44. DOI: 10.5220/0004546300370044

@conference{kdir13,
author={Fatiha Boubekeur. and Fatiha Boubekeur. and Sabrina Cherdioui. and Yassine Djouadi.},
title={Semantic-based Knowledge Discovery in Biomedical Literature},
booktitle={Proceedings of the International Conference on Knowledge Discovery and Information Retrieval and the International Conference on Knowledge Management and Information Sharing - Volume 1: KDIR, (IC3K 2013)},
year={2013},
pages={37-44},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0004546300370044},
isbn={978-989-8565-75-4},
}

TY - CONF

JO - Proceedings of the International Conference on Knowledge Discovery and Information Retrieval and the International Conference on Knowledge Management and Information Sharing - Volume 1: KDIR, (IC3K 2013)
TI - Semantic-based Knowledge Discovery in Biomedical Literature
SN - 978-989-8565-75-4
AU - Boubekeur, F.
AU - Boubekeur, F.
AU - Cherdioui, S.
AU - Djouadi, Y.
PY - 2013
SP - 37
EP - 44
DO - 10.5220/0004546300370044

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