ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes

Askarbek Orakov, Nazgul Sakenova, Igor Goryanin, Anatoly Sorokin

Abstract

The functional and taxonomic analysis is the critical step in understanding the interspecies interaction within the microbial communities. Currently, these types of analysis are run independently, which makes interpretation of the results hard and error-prone. Here we present ASAR (Advanced metagenomic Sequence Analysis in R) Database, the interactive tool and the databases for storage and exploratory analysis of the metagenomic sequencing data along three dimensions: taxonomy, function, and environmental conditions.

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Paper Citation


in Harvard Style

Orakov A., Sakenova N., Goryanin I. and Sorokin A. (2018). ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes.In Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 4: BIOINFORMATICS, ISBN 978-989-758-280-6, pages 196-200. DOI: 10.5220/0006722801960200


in Bibtex Style

@conference{bioinformatics18,
author={Askarbek Orakov and Nazgul Sakenova and Igor Goryanin and Anatoly Sorokin},
title={ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes},
booktitle={Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 4: BIOINFORMATICS,},
year={2018},
pages={196-200},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0006722801960200},
isbn={978-989-758-280-6},
}


in EndNote Style

TY - CONF

JO - Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 4: BIOINFORMATICS,
TI - ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes
SN - 978-989-758-280-6
AU - Orakov A.
AU - Sakenova N.
AU - Goryanin I.
AU - Sorokin A.
PY - 2018
SP - 196
EP - 200
DO - 10.5220/0006722801960200