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Authors: Eriksson Monteiro ; Pedro Sernadela ; Sérgio Matos ; Carlos Costa and José Luís Oliveira

Affiliation: Institute of Electronics and Telematics Engineering of Aveiro (IEETA) and University of Aveiro, Portugal

ISBN: 978-989-758-170-0

Keyword(s): Semantic Web, Healthcare Information Management, Clinical Reports, Radiology, Text-mining.

Related Ontology Subjects/Areas/Topics: Biomedical Engineering ; Data Engineering ; Databases and Datawarehousing ; Enterprise Information Systems ; Health Information Systems ; Information Systems Analysis and Specification ; Knowledge Management ; Ontologies and the Semantic Web ; Semantic Interoperability ; Society, e-Business and e-Government ; Web Information Systems and Technologies

Abstract: The tremendous quantity of data stored daily in healthcare institutions demands the development of new methods to summarize and reuse available information in clinical practice. In order to leverage modern healthcare information systems, new strategies must be developed that address challenges such as extraction of relevant information, data redundancy, and the lack of associations within the data. This article proposes a pipeline to overcome these challenges in the context of medical imaging reports, by automatically extracting and linking information, and summarizing natural language reports into an ontology model. Using data from the Physionet MIMIC II database, we created a semantic knowledge base with more than 6.5 millions of triples obtained from a collection of 16,000 radiology reports.

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Paper citation in several formats:
Monteiro E., Sernadela P., Matos S., Costa C. and Oliveira J. (2016). Semantic Knowledge Base Construction from Radiology Reports.In Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 5: HEALTHINF, (BIOSTEC 2016) ISBN 978-989-758-170-0, pages 345-352. DOI: 10.5220/0005709503450352

@conference{healthinf16,
author={Eriksson Monteiro and Pedro Sernadela and Sérgio Matos and Carlos Costa and José Luís Oliveira},
title={Semantic Knowledge Base Construction from Radiology Reports},
booktitle={Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 5: HEALTHINF, (BIOSTEC 2016)},
year={2016},
pages={345-352},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0005709503450352},
isbn={978-989-758-170-0},
}

TY - CONF

JO - Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 5: HEALTHINF, (BIOSTEC 2016)
TI - Semantic Knowledge Base Construction from Radiology Reports
SN - 978-989-758-170-0
AU - Monteiro E.
AU - Sernadela P.
AU - Matos S.
AU - Costa C.
AU - Oliveira J.
PY - 2016
SP - 345
EP - 352
DO - 10.5220/0005709503450352

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